Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821239.1_cds_XP_016500705.1_14509
CDS Infomation

[gene=LOC107819133] [db_xref=GeneID:107819133] [protein=pre-mRNA-splicing factor 38B-like] [protein_id=XP_016500705.1] [location=join(315123..315413,317462..317542,318427..318498,319245..320108)] [gbkey=CDS]
Sequence

ATGGCTGAGATTAAGACTTCTGGGAGACCGATCGACCAATTGCTGGAGAAGGTTCTGTGC
ATGAACATTCTCTCTTCTGATTATTTCAGAGACCTATTGCGCCTGAAAACTTATCACGAA
GTGATTGATGAAATTTATAATCAAGTTGACCATGTGGAACCATGGATGACTGGCAACTGT
CGTGGTCCTTCAACAGCCTTCTGCCTTCTCTACAAGTTCTTTACGATGAAACTTACTGTC
AAGCAAATGCATGGCCTGTTAAAGCATCCAGATTCTCCTTACATTAGAGCTGTTGGGTTC
CTTTATCTGAGATATCTTGCTGATTTTAAGACATTATGGGCTTGGTATGAGCCTTATCTC
AAAGATGATGAGGAATTCTCTCCTGGATCCAGTGGCCGAATGACCACAATGGGCGTATAT
GTGCGTGACTTGTTTCTCGGACAGTATTATTTTGACACACTATTACCCCGGATTCCTGTT
CCTGTTATGCGGACAGCAGTTGCCAATCTCGAAAAAATGAATCTCCCGACCAAACCCTCT
GGTTCGATCGGGGACTCTAGTCGTGGATCTGAGGAAACCTCCCGTCGGCCACCTTCTGTC
AAAGCTTCCCTTTCAGTGTCTTTTGGTCAGCGTGCACCTCATCGTGCATCAACTAGAGAT
TCATCTCCCATCCGACGTACAATCGCACCACCACCCTATGATAAGGATGGTGCAGATGAT
TCAAGACGGTCCCCCAGCATCCGCCGGAGTCAAAGTCGTGATATATCTGACCGAGAGAAT
TCCGAAAGGGACAGGGGCCGAGACAGAGAGAGGGAGAAGGAAAGGCCTAGGGACAGAGAC
CGTGATAGGGATAGGGATCGATATAGGGACCGGGACCAGGAAAGAGAAAGGGAGAGGGGC
AGGGATCGGGATAGAGATAAGAGGTATGATTATGAGAGAGATCGTGAAAGGGATAGAGAC
AGGAGGTATGATTATGACAGACATCGGGGAAGGGATAGAGACAGGAGATATGATTATGAT
AGAAGTTCAAGAGAAAGAAGCAGAAGAGACTATGAAAGGAGCAGGAGCCGGAGTAGGAGT
CGAAGCCACAGCCGAAGTTTGCATGATCAAGGGACCAGTCTTGATCAACAGCGAACTCCA
CCTAGAGATGAAAGCAAGGAAAAGAAGGCTGCATCTAGCAATCTTGCCAAGCTTAAAGAT
CTATATGGTGACTTAGGCAGTCAAAAGGAGAACGTAGGCGGCGAGAGGGCTCCAAACAGG
GATACAAGTACTGAGGAGGTTATCAGACTTGGTGGTTCGTGGAGGTAG

Peptide Sequence

PEP ID

XP_016500705.1
PEP Infomation

PREDICTED: pre-mRNA-splicing factor 38B-like [Nicotiana tabacum]
Sequence

MAEIKTSGRPIDQLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYNQVDHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYLADFKTLWAWYEPYL
KDDEEFSPGSSGRMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMRTAVANLEKMNLPTKPS
GSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPIRRTIAPPPYDKDGADD
SRRSPSIRRSQSRDISDRENSERDRGRDREREKERPRDRDRDRDRDRYRDRDQERERERG
RDRDRDKRYDYERDRERDRDRRYDYDRHRGRDRDRRYDYDRSSRERSRRDYERSRSRSRS
RSHSRSLHDQGTSLDQQRTPPRDESKEKKAASSNLAKLKDLYGDLGSQKENVGGERAPNR
DTSTEEVIRLGGSWR

Transcript Sequence

Gene sequence data has not been registered.